以林木表观遗传学为主线，以福建种植面积较广的禾本科毛竹以及林木模式树种为主要研究对象，解析竹子快速生长和开花调控机理，以及林木次生木质响应干旱胁迫的表观应答机制（图一）。作为第一完成人“南方主要树种的种质创新技术研发与应用”获得第十四届梁希林业科学技术奖。目前为林业青年科技奖获得者、福建省引进高层次人才、福建农林大学“金山学者”。先后主持国家自然科学基金面上项目三项，重点研发专项子课题三项。共有六十多篇SCI论文发表, H指数(H-index)为34。总引用为4268次。近五年作为通讯作者在Genome Biology、New Phytologist、Plant Physiology、Tree Physiology、Plant Journal和Journal of Integrative Plant Biology等期刊发表林木表观遗传学论文。以下从竹子生长发育和林木的干旱胁迫响应这几个方面简述在林木表观遗传学领域的主要学术成绩、创新点及其科学意义。

图一 建立竹子基因功能研究体系并揭示甲基化和拼接对竹子发育的表观遗传学调控

（1）建立了高效便捷的竹子功能基因研究体系

竹子遗传转化普遍存在周期较长、愈伤再生困难和效率不高等缺点，经过优化体系，成功开发出了基于竹花叶病毒的可携带外源基因的高效表达载体系统。改造后的竹花叶病毒载体可以驱动高达4.5kb长度片段裸眼可视的报告系统（RUBY）的表达(专利申请号:202310105479.4)，在麻竹和毛竹上均呈现明显甜菜碱的红色指示 (Journal of Integrative Plant Biology，2023, 封面文章)。该技术体系提供了一种侵染效率高、表达效果好以及实验周期短的研究竹子功能基因组的方法，特别是发现该载体可以驱动Cas9的表达, 这为在竹子中进行病毒诱导基因组编辑提供了前期基础(New Phytologist，2024, In Revision)。可以同时侵染丛生竹毛竹和散生竹麻竹，无疑将成为禾本科竹子功能基因组研究的利器（图二）。

图二 建立了基于竹花叶病毒的研究麻竹和毛竹的功能基因技术体系

除此之外, 也建立了毛竹和麻竹的原生质体瞬时转化流程（Journal of Plant Biology，2021）以及病毒诱导的林木基因沉默等技术体系（授权专利号: ZL201910632331.X, ZL201811459796.1 和ZL201811459776.4），上述技术为林木功能基因研究奠定了坚实的基础。为了进一步深入解析麻竹基因功能，进一步破译了六倍体麻竹分型基因组，揭示了散生竹和丛生竹之间的宏观共线性关系及部分微观共线性的差异，为后续在进化层面及基因功能机制研究等方面提供依据，并为充分利用竹类资源奠定坚实的理论基础（Journal of Integrative Plant Biology，2022）。上述成果为竹功能研究体系的建立奠定了基础，被中国科学报等媒体宣传报道，并以JIPB期刊封面故事的形式被推介。

（2）推进了竹子生长发育的表观遗传学调控研究

竹子开花周期长和竹笋快速生长是两个具有代表性的生物学特征。重点关注甲基化和环状RNA对开花和竹笋生长的调控, 揭示了毛竹后期竹笋和早期竹笋相比具有更高5-甲基胞嘧啶水平，同时具有更短Poly(A)尾长度的基因其CG类型的DNA甲基化水平也更低， RNA甲基化研究揭示竹笋早期具有更高的N⁶-甲基腺嘌呤修饰比例（Plant Physiology，2022）。同时发现环状RNA（反向拼接的长链非编码RNA）在不同竹笋高度的关键发育点具有明显的时期特异性，调控竹笋发育的关键节点基因富集产生环状RNA并受miRNA的调控，过表达毛竹的miRNA156，可以明显降低cir-TRF1的表达量（Plant and Cell Physiology, 2019）。进一步使用修改过的适用于环状RNA的反转录接头（包含10个简并碱基N）进行反转录，发现毛竹环状RNA受到N⁶-甲基腺嘌呤修饰的调控 (JIPB, 2020)和转录后调控 (Bioinformatics, 2019)。系统探究了毛竹激素诱导环状RNA的形成、降解和功能，选取关键调控激素诱导环状RNA进行稳定过表达, 可观察到株高的变化， 为后续进一步深入研究毛竹环状RNA在激素响应中的调控功能奠定了前期基础(Genomics, Proteomics & Bioinformatics, 2023)。上述研究成果为借助于遗传转化的手段探究竹子生长发育的表观调控机制提供了十分重要的功能候选基因 (图三)。

图三 毛竹笋快速生长过程中的表观遗传学调控

地下鞭根在竹笋的快速生长中发挥十分重要的作用。毛竹地下鞭根侧芽可以发育成竹鞭和竹笋两种截然不同的形态，从而影响笋用林和材用林的经营。对毛竹地下鞭根系统进行细胞学切片发现从母竹基部开始到竹鞭鞭稍细胞学形态有明显差异，靠近鞭稍区域夹角变小。呈现出侧芽距离母竹越远，甲基化程度越高的规律。探究了竹笋发育过程转录后调控作用，对毛竹地下系统几个关键组织的选择性拼接和选择性多聚腺苷酸化进行了全面解析，发现二者相互关联调控转运蛋白、转录因子、纤维素合成酶及翻译调节因子等相关基因（Plant Journal, 2017; International Journal of Biological Macromolecules, 2023），上述Plant Journal相关工作被引用达173次，为高被引论文。上述研究对指导笋用林和材用林的经营具有重要的理论意义。对毛竹笋单节间不同部位和不同时期的甲基化修饰和转录后调控机制进行了系统分析，并对这些表观遗传途径的内在联系进行了初步探索（图三）。除了快速生长, 也对毛竹营养生长到开花过程的DNA甲基化进行了初探, 发现毛竹随着年龄增长，转座子和注释基因中的CHH甲基化水平在营养生长到生殖生长过程中逐渐积累，这种CHH的变化是由24nt-siRNA和DRM2引起的，该发现为检测毛竹林年龄提供了一种的表观遗传学标记。CG获得或丢失位点的差异甲基化区域，富集在营养生长到生殖生长转变过程相关基因，甲基化的变化导致开花相关的基因在开花材料中呈现较高的表达，为最终揭示DNA甲基化调控毛竹开花的机制提供了重要的铺垫（Plant Journal，2021），上述相关工作被Annual Review of Entomology、Plant Physiology和Plant Communications等期刊报道。基于前期林学相关成果作为第一完成人获得第十四届梁希林业科学技术奖。

（3）促进了林木次生生长甲基化胁迫应答相关研究

N⁶-甲基腺嘌呤作为一种重要调控因子响应林木次生木质部逆境胁迫，但相关的研究未见报道。首次解析了毛果杨次生木质部干旱胁迫下RNA表观修饰的应答调控及m⁶A和选择性多聚腺苷酸化的关联。在该研究中，首次建立了可直接在单碱基和单转录本水平定量检测m⁶A修饰的体系，通过该体系发现m⁶A是一种广泛存在于杨树次生木质部的RNA修饰，在调控RNA拼接和翻译等方面具有重要的作用（Genome Biology, 2021; JIPB，2021; Plant Physiology, 2022）。通过该体系发现：在干旱胁迫下，杨树次生木质部纤维素、半纤维素和木质素合成相关的转录本m⁶A修饰率明显升高，从而导致这些基因的表达量明显下调；m⁶A修饰的变化导致较多地发生了远端poly(A)位点到近端poly(A)位点的切换。这些发现为杨树次生木质部干旱胁迫下表观应答调控提供了全新的视角。上述研究获得了关键的非生物胁迫相关的m⁶A修饰调控候选基因，为后续通过过表达和基因编辑技术产生抗性的林木材料奠定了前期基础。上述Genome Biology文章成果自发表以来已被Nature biotechnology和 Nature communication等期刊引用124次。除了RNA表观修饰对抗旱的调控研究外, 最后探究了DNA甲基化修饰对林木抗逆的影响（Plant Journal, 2019, 2023）, 为抗逆林木遗传材料的培育提供了理论指导。

招生方向: 

     欢迎有志林木表观遗传学和生物信息学的博士生和研究生联系报考事宜

招生专业(学科)  

        林木遗传育种

                 0710J1生物育种        

                086001 生物技术与工程    

承担《林木遗传育种学》、《生物学基础及应用》、《林木生物信息学》和《分子生物学进展课程》的教学和本科生班主任工作。

2025年

(40)   Lin Wu, Jun Yang, Yuying Gu, Qianyi Wang, Zeyu Zhang, Hongjue Guo, Liangzhen Zhao, Hangxiao Zhang and Lianfeng Gu*. (2025). Bamboo mosaic virus-mediated transgene-free genome editing in bamboo. New Phytologist. New Phytologist Wu et al.pdf   

(39) Huihui Wang, Huiyuan Wang, Yue Jia, Xiaoxia Jin, Hongwei Wu, Siyu Yang, Liangzhen Zhao, Hangxiao Zhang, Lianfeng Gu*. (2025). The RNA m6A Methyltransferase PheMTA1 and PheMTA2 of Moso Bamboo Regulate Root Development and Resistance to Salt Stress in Plant. Plant, Cell & Environment.  2025-Plant-Cell-Environment.pdf

(38) Huihui Wang, Huiyuan Wang, Hongwei Wu, Kanrui Lou, Xiaoxia Jin, Meixuan Tang, Zixuan Wang, Liangzhen Zhao, Lianfeng Gu*, Hangxiao Zhang*. (2025)  Transcriptome-wide m6A modification and poly(A) tail length changes in moso bamboo induced by gibberellin revealed by nanopore direct RNA sequencing . Industrial Crops and Products 225 (2025): 120549. 2025-1-s2.0-S0926669025000950-main.pdf

2024年

(37)   Jundong Rong, Yushan Zheng*, Zeyu Zhang, Jun Zhang, Yuying Gu, Tian Hua, Mengna Zhao, Lili Fan, Zhiwen Deng, Yanmei Pan, Bingjun Li, Liguang Chen, Tianyou He, Lingyan Chen, Jing Ye, Hangxiao Zhang, Lianfeng Gu*. (2024). De novoWhole-Genome Assembly of the 10-Gigabase Fokienia HodginsiiGenome to Reveal Differential Epigenetic Events Between Callus and Xylem. Advanced Science, 2402644. 2024-Fokienia-Hodginsii.pdf

(36) Jutang Jiang, Zeyu Zhang, Yucong Bai, Xiaojing Wang, Yuping Dou, Ruiman Geng, Chongyang Wu, Hangxiao Zhang, Cunfu Lu, Lianfeng Gu*, Jian Gao* (2024). Chromosomal‐level genome and metabolome analyses of highly heterozygous allohexaploid Dendrocalamus brandisiielucidate shoot quality and developmental characteristics. Journal of Integrative Plant Biology. 66(6), 1087-1105. 2024-JIPB-Dendrocalamus.pdf

(35)  Jun Zhang, Lin Wu, Lele Mu, Yuhua Wang, Mengna Zhao, Huiyuan Wang, Xiangrong Li, Liangzhen Zhao, Chentao Lin, Hangxiao Zhang, Lianfeng Gu*. (2024). Evolution and post-transcriptional regulation insights of m⁶A writers, erasers, and readers in plant epitranscriptome. The Plant Journal, 120(2), 505-525. 2024-PJ-m6A-100034881.pdf

(34)  Chuanyu Zhang, Haohao Tang, Tuhe Li, Hongwei Wu, Yuying Gu, Jun Zhang, Zeyu Zhang, Liangzhen Zhao, Yaxing Li*, Lianfeng Gu*,and Hangxiao Zhang*. (2024). Integrating Physiological Features and Proteomic Analyses Provides New Insights in Blue/Red Light-Treated Moso Bamboo (Phyllostachys edulis). Journal of Agricultural and Food Chemistry. Agric. Food Chem. 2024, 72, 22, 12859–12870. 2024-proteomic-blue-red-light.pdf 

2023年

(33)  Yandong Jin; Baijie Wang; Mingchuan Bao; Yujie Li; Shengwu Xiao; Yuhua Wang; Jun Zhang; Liangzhen Zhao; Hangxiao Zhang; Yau-Heiu Hsu; Mingjie Li; Lianfeng Gu. (2023). Development of an efficient expression system with large cargo capacity for interrogation of gene function in bamboo based on bamboo mosaic virus, Journal of Integrative Plant Biology, 65(6): 1369-1382  2023-jipb13468.pdf

(32)  Yuxiang Liufu, Feihu Xi, Lin Wu, Zeyu Zhang, Huihui Wang, Huiyuan Wang, Jun Zhang, Baijie Wang, Wenjing Kou, Jian Gao, Liangzhen Zhao, Hangxiao Zhang, Lianfeng Gu.(2023). Inhibition of DNA and RNA methylation disturbs root development of moso bamboo. Tree Physiology, 43(9), pp.1653-1674.  2023-tpad074.pdf

(31)  Yongsheng Wang; Huihui Wang; Huiyuan Wang; Ruifan Zhou; Ji Wu; Zekun Zhang; Yandong Jin; Tao Li; Markus V. Kohnen; Xuqing Liu; Wentao Wei; Kai Chen; Yubang Gao; Jiazhi Ding; Hangxiao Zhang; Bo Liu; Chentao Lin; Lianfeng Gu. (2023). Multi-omics of circular RNAs and their responses to hormones in Moso bamboo (Phyllostachys edulis), Genomics, Proteomics & Bioinformatics, 0(0): doi: 10.1016/j.gpb.2023.01.007  2023-GPB-hormone_Phyllostachys_edulis_.pdf

(30)  Yong Zhang; Yongcheng Wei; Jingxiang Meng; Yujiao Wang; Sen Nie; Zeyu Zhang; Huiyuan Wang; Yongkang Yang; Yubang Gao; Ji Wu; Tuhe Li; Xuqing Liu; Hangxiao Zhang; Lianfeng Gu. (2023) Chromosome-scale de novo genome assembly and annotation of three representative Casuarina species: C. equisetifolia, C. glauca, and C. cunninghamiana. Plant Journal. 114(6), pp.1490-1505. 2023-PJ-Applet_2023-5-4_168319538438044.pdf

(29)  Jiakai Liao, Ban Deng, Qixin Yang, Yu Li, Yuxiang Zhang, Jiajing Cong, Xiaqin Wang, Markus V. Kohnen, Zhong-Jian Liu, Meng-Zhu Lu, Deshu Lin, Lianfeng Gu,Bobin Liu, (2023). Insights into Cryptochrome Modulation of ABA Signaling to Mediate Dormancy Regulation in Marchantia polymorpha. New Phytologist. 238(4), 1479-1497. 2023-NP.pdf

(28)  Xi, Feihu, Zeyu Zhang, Lin Wu, Baijie Wang, Pengfei Gao, Kai Chen, Liangzhen Zhao, Jian Gao, Lianfeng Gu, and Hangxiao Zhang. Insight into gene expression associated with DNA methylation and small RNA in the rhizome-root system of Moso bamboo. International Journal of Biological Macromolecules248 (2023): 125921.  2023-IJBM.pdf

2022年

(27)  Tao Li; Huihui Wang; Yaxin Zhang; Huiyuan Wang; Zeyu Zhang; Xuqing Liu; Zekun Zhang; Kai Liu; Deming Yang; Hangxiao Zhang; Lianfeng Gu. (2022). Comprehensive profiling of epigenetic modifications in fast-growing moso bamboo shoots, Plant Physiology, 191(2): 1017-1035 2022-kiac525.pdf

(26)  Yubang Gao; Xuqing Liu; Yandong Jin; Ji Wu; Shuang Li; Yaxing Li; Binqing Chen; Yaxin Zhang; Linxiao Wei; Wei Li; Ruili Li; Chentao Lin; Anireddy S N Reddy; Pankaj Jaiswal; Lianfeng Gu. (2022). Drought induces epitranscriptome and proteome changes in stem-differentiating xylem of Populus trichocarpa, Plant Physiology, 19(1): 459-479 2022-kiac272.pdf

(25)  Yushan Zheng; Deming Yang; Jundong Rong1; Liguang Chen; Qiang Zhu; Tianyou He; Lingyan Chen; Jing Ye; Lili Fan; Yubang Gao; Hangxiao Zhang; Lianfeng Gu. (2022). Allele-aware chromosome-scale assembly of the allopolyploid genome of hexaploid Ma Bamboo (Dendrocalamus latiflorusMunro), Journal of Integrative Plant Biology, 64(3): 649-670 2022-JIPB-Ma_bamboo .pdf

(24) Zekun Zhang; Huiyuan Wang; Ji Wu; Yandong Jin; Shengwu Xiao; Tao Li; Xuqinq Liu; Hangxiao Zhang; Zeyu Zhang; Jun Su; Jingzao Liu; Xiaoyan Wang; Yubang Gao; Xiangqing Ma; Lianfeng Gu. (2022). Comprehensive Transcriptome Analysis of Stem-Differentiating Xylem Upon Compression Stress in Cunninghamia Lanceolata. Frontiers in Genetics, 87. 2022-fgene-13-843269.pdf

(23) Yaxing Zhang, Jun Zhang, Deming Yang, Yandong Jin, Xuqing Liu, Zeyu Zhang, Lianfeng Gu, Hangxiao Zhang, 2022. Genome-wide identification of NAP1 and function analysis in moso bamboo (Phyllostachys edulis). International Journal of Molecular Sciences. 23(12), 6491 2022-ijms-23-06491.pdf

(22) Liufu, Y., Liu, X., Wu, L., Zhang, H., Gao, Y. and Gu, L. (2022). An Analysis Pipeline for Identification of RNA Modification, Alternative Splicing and Polyadenylation Using Third Generation Sequencing. Bio-101: e4433. DOI: 10.21769/BioProtoc.4433. 2022-Bio-protocol4433.pdf

(21) Wentao Wei; Huiyuan Wang; Xuqing Liu; Wenjing Kou; Ziqi Liu; Huihui Wang; Yongkang Yang; Liangzhen Zhao; Hangxiao Zhang; Bo Liu; Xiangqing Ma; Lianfeng Gu.(2022). Transcriptome Profiling of Stem-Differentiating Xylem in Response to Abiotic Stresses Based on Hybrid Sequencing in Cunninghamia lanceolata. IJMS, 23(22), 13986.       2022-11-12-ijms-23-13986.pdf

2021年

(20) Yubang Gao; Xuqing Liu; Bizhi Wu; Huihui Wang; Feihu Xi; Markus V. Kohnen; Anireddy S. N. Reddy; Lianfeng Gu. (2021). Quantitative profiling of N⁶-methyladenosine at single-base resolution in stem-differentiating xylem of Populus trichocarpa using Nanopore direct RNA sequencing, Genome Biology, 22(1): 1-17  2021-GB.pdf

(19) Kai Chen; Kaiqiang Hu; Feihu Xi; Huihui Wang; Markus Kohnen; Pengfei Gao; Jiakai Liao; Wentao W; Xuqing Liu; Hangxiao Zhang; Lianfeng Gu. (2021). High-Efficient and Transient Transformation of Moso Bamboo (Phyllostachys edulis) and Ma Bamboo (Dendrocalamus latiflorusMunro), Journal of Plant Biology, 66: 75-86 2021-JPB.pdf

(18) Zeyu Zhang; Huihui Wang; Yongsheng Wang; Feihu Xi; Huiyuan Wang; Markus V. Kohnen; Pengfei Gao; Wentao Wei; Kai Chen; Xuqing Liu; Yubang Gao; Ximei Han; Kaiqiang Hu; Hangxiao Zhang; Qiang Zhu; Yushan Zheng; Bo Liu; Ayaz Ahmad; Yau‐Heiu Hsu; Steven E. Jacobsen; Lianfeng Gu. (2021). Whole genome characterization of chronological age-associated changes in methylome and circular RNAs in moso bamboo (Phyllostachys edulis) from vegetative to floral growth, The plant journal, 106(2): 435-453 2021-PJ-16999030.pdf

(17) Xuqing Liu; Yubang Gao; Jiakai Liao; Miao Miao; Kai Chen; Feihu Xi; Wentao Wei; Zhuihu Wang; Yongsheng Wang; Xi Xu; Anireddy S.N. Reddy; Lianfeng Gu. (2021). Genome-wide profiling of circular RNAs, alternative splicing, and R-loops in stem-differentiating xylem of Populus trichocarpa, Journal of Integrative Plant Biology, 63(7): 1294-1308 2021-jipb13081.pdf

(16) Jian Wang, Bizhi Wu, Markus V. Kohnen, Daqi Lin,Changcai Yang,Xiaowei Wang,Ailing Qiang, Wei Liu,Jianbin Kang, Hua Li,Jing Shen,Tianhao Yao, Jun Su*,Bangyu Li*,and Lianfeng Gu. (2021). Classification of Rice Yield Using UAV-Based Hyperspectral Imagery and Lodging Feature, Plant Phenomics, DOI: 10.34133/2021/9765952 2021-PlantPhenomics-9765952.pdf

(15) Huiyuan Wang, Sheng Liu, Xiufang Dai, Yongkang Yang, Yunjun Luo, Yubang Gao, Xuqing Liu, Wentao Wei, Huihui Wang, Xi Xu, Anireddy S. Reddy, Pankaj Jaiswal, Wei Li, Bo Liu and Lianfeng Gu (2021). PSDX: A comprehensive multi-omics association database of Populus trichocarpa with a focus on the secondary growth in response to stresses Front. Plant Sci. | doi: 10.3389/fpls.2021.655565 2021-fpls-12-655565.pdf

(14) Wang, Xu , Bochen Jiang, Lianfeng Gu,Yadi Chen, Manuel Mora, Mulangma Zhu, Eliace Noory, Qin Wang, and Chentao Lin. A photoregulatory mechanism of the circadian clock in Arabidopsis. Nature Plants 7, no. 10 (2021): 1397-1408. 2021-Nature_plant.pdf

2020年

(13) Yongsheng Wang; Huihui Wang; Feihu Xi; Huiyuan Wang; Ximei Han; Wentao Wei; Hangxiao Zhang; Qianyue Zhang; Yushan Zheng; Qiang Zhu; Markus V. Kohnen; Anireddy S. N. Reddy; Lianfeng Gu. (2020). Profiling of circular RNA N⁶‐methyladenosine in moso bamboo (Phyllostachys edulis) using nanopore-based direct RNA sequencing, Journal of Integrative Plant Biology, 62(12): 1823-1838  2020 jipb.13002.pdf

(12) Reddy, A. S., Huang, J., Syed, N. H., Ben-Hur, A., Dong, S., Lianfeng Gu.(2020). Decoding co-/post-transcriptional complexities of plant transcriptomes and epitranscriptome using next-generation sequencing technologies. Biochemical Society Transactions, Biochemical Society Transactions, 48(6), 2399-2414. 2020-GLF-R2.pdf

2019年

(11) Huiyuan Wang; Huihui Wang; Hangxiao Zhang; Sheng Liu; Yongsheng Wang; Yubang Gao; Feihu Xi; Liangzhen Zhao; Bo Liu; Anireddy S. N. Reddy; Chentao Lin; Lianfeng Gu. (2019). The interplay between microRNA and alternative splicing of linear and circular RNAs in eleven plant species, Bioinformatics, 35(10): 1-8 2019-3-bioinformatics.pdf

(10) Yongsheng Wang; Yubang Gao; Hangxiao Zhang; Huihui Wang; Xuqing Liu; Xi Xu; Zeyu Zhang; Markus V. Kohnen; Kaiqiang Hu; Huiyuan Wang; Feihu Xi; Liangzhen Zhao; Chentao Lin; Lianfeng Gu. (2019). Genome-wide profiling of circular RNAs in the rapidly growing shoots of moso bamboo (Phyllostachys edulis), Plant and Cell Physiology, 60(6): 1354-1373 2019-4-PCP.pdf

(9) Yu X, Wang Y, Kohnen M, Piao M, Tu M, Gao Y, Lin C, Zuo Z, Lianfeng Gu.(2019). Large Scale Profiling of Protein Isoforms Using Label-Free Quantitative Proteomics Revealed the Regulation of Nonsense-Mediated Decay in Moso Bamboo (Phyllostachys edulis). Cells. 8(7), 744;2019-7-cells-08-00744.pdf

(8) Zhao L, Zhang H, Kohnen M, Prasad K, Lianfeng Gu, Reddy A. (2019), Analysis of transcriptome and epitranscriptome in plants using PacBio Iso-Seq and Nanopore-based direct RNA sequencing. Front. Genet. doi: 10.3389/fgene.2019.00253 2019-5-fgene-10-00253.pdf

(7) Wu B, Zhang H, Lin L, Wang H, Gao Y, Zhao L, Chen YP, Chen R, Lianfeng Gu(2019), A similarity searching system for biological phenotype images using deep convolutional encoder-decoder architecture. Current Bioinformatics, DOI: 10.2174/1574893614666190204150109 2019-1-MS CBIO 2nd Proof-BizhiWu.pdf

(6) Gao Y, Xi F, Zhang H, Liu X, Wang H, Zhao L, Reddy A, Lianfeng Gu(2019), Single-molecule real-time (SMRT) isoform sequencing (Iso-Seq) in plants: The status of the bioinformatics tools to unravel the transcriptome complexity, Current Bioinformatics, DOI : 10.2174/1574893614666190204151746 2019-2-MS CBIO and Proof-yubangGao.pdf

(5) Liu Xu, Gao Y, Zhao L, Cai Y, Wang H, Miao M, Lianfeng Gu,Zhang H (2019) Biogenesis, research methods, and functions of circular RNAs. Hereditas. Vol. 41 Issue (6): 469-485 

2018年

(4) Gongfu Ye; Hangxiao Zhang; Bihua Chen; Sen Nie; Hai Liu; Wei Gao; Huiyuan Wang; Yubang Gao; Lianfeng Gu. (2018). De novogenome assembly of the stress tolerant forest species Casuarina equisetifolia provides insight into secondary growth, Plant Journal, 97(4): 779-794  2018-2-tpj.14159.pdf

(3) Yubang Gao; Huiyuan Wang; Hangxiao Zhang; Yongsheng Wang; Jinfeng Chen; Lianfeng Gu. (2018). PRAPI: post-transcriptional regulation analysis pipeline for Iso-Seq, Bioinformatics, 34(9): 1580-15822017-10-10.1093@bioinformatics@btx830.pdf

2017年

(2) Zhang H, Wang H, Zhu Q, Gao Y, Wang H, Zhao L, Wang Y, Xi F, Wang W, Yang Y, Lin C, Gu L (2018), Transcriptome characterization of moso bamboo (Phyllostachys edulis) seedlings in response to exogenous gibberellin applications, BMC plant biology,2018,18:125 2018-3-Bamboo-GA.pdf

(1) Taotao Wang; Huiyuan Wang; Dawei Cai; Yubang Gao; Hangxiao Zhang; Yongsheng Wang; Chentao Lin; Liuyin Ma; Lianfeng Gu. (2017). Comprehensive profiling of rhizome-associated alternative splicing and alternative polyadenylation in moso bamboo (Phyllostachys edulis)., The plant journal, 91(4): 684-6992017-3-The_Plant_Journal.pdf

2016年之前相关全部论文

https://scholar.google.com/citations?user=jnrDUeQAAAAJ&hl=en

梁希林业科学技术奖科技进步奖(三等) - 南方主要树种的种质创新关键技术研发与应用, 第一完成人。

第十四届林业青年科技奖

专利